Array
(
    [experiment] => Array
        (
            [0] => stdClass Object
                (
                    [BioSample] => SAMEA7189973
                    [wgsExptID] => 8
                    [Batch] => Oxford_5
                    [SeqLaboratory] => Wellcome Trust Centre for Human Genetics
                    [Platform] => Illumina
                    [InstrumentModel] => HiSeq4000
                    [ReadType] => 100bp:PAIRED:20X
                    [LibraryPrep] => WTCHG, PCR FREE
                    [PcrFree] => Y
                    [SampleCount] => 5
                    [DateSubmitted] => 
                    [FastqID] => 464
                    [wgsID] => 108
                    [fwdFile] => V_21485_R1.fastq.gz
                    [fwdMd5] => 8cb214510e784c32606c083be8ef6730
                    [revFile] => V_21485_R2.fastq.gz
                    [revMd5] => c12b6ace2b375232aca98458edbcb917
                    [rawReads] => 
                    [FastqRCS] => 1
                    [enaExperiment] => ERX10825750
                    [enaRun] => ERR11417904
                )

        )

    [analysis] => Array
        (
            [0] => stdClass Object
                (
                    [wgsAnalysisID] => 285
                    [wgsID] => 108
                    [refGenome] => cf4
                    [dateSubmitted] => 2023-02-13 11:30:00
                    [dateCompleted] => 2023-02-14 05:26:00
                    [bamMd5] => 0d4553d98dd702a8ec97cac6a6996df9
                    [rdsBam] => 1
                    [rcsBam] => 1
                    [totalReads] => 1443181632
                    [primaryReads] => 
                    [mappedReads] => 1438233165
                    [primaryMapped] => 
                    [pairedReads] => 1406059914
                    [meanInsertSize] => 248.73
                    [meanReadDepth] => 27.89
                    [variantsCalled] => 5954200
                    [variantsFiltered] => 5648656
                    [snpCount] => 4018013
                    [snpHom] => 
                    [snpHet] => 
                    [indelCount] => 1639144
                    [insHom] => 
                    [delHom] => 
                    [insHet] => 
                    [delHet] => 
                    [genomicsDB] => cf4-gundog
                    [varsity] => 0
                    [enaAnalysis] => ERZ21789627
                    [enaBam] => ftp.sra.ebi.ac.uk/vol1/analysis/ERZ217/ERZ21789627/V_21485-cf4.bam
                )

        )

)

Sample Analyses

StartedResearcherCasesControlsStatus
20/05/2019 17:10eschofield254Running
12/05/2019 11:01eschofield250Completed
28/04/2019 12:33eschofield150Completed
28/04/2019 10:26eschofield150Error
28/04/2019 09:15eschofield150Error
20/04/2019 16:54eschofield140Completed

Results

chr3:40808242