Array
(
    [experiment] => Array
        (
            [0] => stdClass Object
                (
                    [BioSample] => SAMEA7190202
                    [wgsExptID] => 12
                    [Batch] => Edinburgh_2
                    [SeqLaboratory] => Edinburgh Genomics
                    [Platform] => Illumina
                    [InstrumentModel] => HiSeq X
                    [ReadType] => 150bp:PAIRED:30X
                    [LibraryPrep] => Edinburgh Genomics, TruSeq Nano
                    [PcrFree] => N
                    [SampleCount] => 36
                    [DateSubmitted] => 
                    [FastqID] => 116
                    [wgsID] => 146
                    [fwdFile] => BaH_28502_R1.fastq.gz
                    [fwdMd5] => 7784bca0511b41c117d8e68c83563a8f
                    [revFile] => BaH_28502_R2.fastq.gz
                    [revMd5] => b98fee0889d0726c251b1b7b765ec666
                    [rawReads] => 
                    [FastqRCS] => 1
                    [enaExperiment] => ERX10686609
                    [enaRun] => ERR11278909
                )

        )

    [analysis] => Array
        (
            [0] => stdClass Object
                (
                    [wgsAnalysisID] => 319
                    [wgsID] => 146
                    [refGenome] => cf4
                    [dateSubmitted] => 2023-03-16 12:18:00
                    [dateCompleted] => 2023-03-17 05:56:00
                    [bamMd5] => e911b66537cb9cdb30b0c9ec17b3b730
                    [rdsBam] => 1
                    [rcsBam] => 1
                    [totalReads] => 918145581
                    [primaryReads] => 
                    [mappedReads] => 916189193
                    [primaryMapped] => 
                    [pairedReads] => 899785508
                    [meanInsertSize] => 466.63
                    [meanReadDepth] => 40.24
                    [variantsCalled] => 6266085
                    [variantsFiltered] => 5896864
                    [snpCount] => 4108651
                    [snpHom] => 
                    [snpHet] => 
                    [indelCount] => 1798513
                    [insHom] => 
                    [delHom] => 
                    [insHet] => 
                    [delHet] => 
                    [genomicsDB] => cf4-hound
                    [varsity] => 0
                    [enaAnalysis] => ERZ21782982
                    [enaBam] => ftp.sra.ebi.ac.uk/vol1/analysis/ERZ217/ERZ21782982/BaH_28502-cf4.bam
                )

        )

)

Sample Analyses

StartedResearcherCasesControlsStatus
20/05/2019 17:10eschofield254Running
12/05/2019 11:01eschofield250Completed
28/04/2019 12:33eschofield150Completed
28/04/2019 10:26eschofield150Error
28/04/2019 09:15eschofield150Error
20/04/2019 16:54eschofield140Completed

Results

chr3:40808242