Array
(
    [experiment] => Array
        (
            [0] => stdClass Object
                (
                    [BioSample] => SAMEA7189948
                    [wgsExptID] => 14
                    [Batch] => Edinburgh_4
                    [SeqLaboratory] => Edinburgh Genomics
                    [Platform] => Illumina
                    [InstrumentModel] => HiSeq X
                    [ReadType] => 150bp:PAIRED:30X
                    [LibraryPrep] => Edinburgh Genomics, TruSeq Nano
                    [PcrFree] => N
                    [SampleCount] => 13
                    [DateSubmitted] => 
                    [FastqID] => 271
                    [wgsID] => 237
                    [fwdFile] => XB_32654_R1.fastq.gz
                    [fwdMd5] => 7646a270c3105e99a7354d6a67d76937
                    [revFile] => XB_32654_R2.fastq.gz
                    [revMd5] => 3f768b31ecc58cd9f218a58e9d47df3b
                    [rawReads] => 
                    [FastqRCS] => 1
                    [enaExperiment] => ERX10140549
                    [enaRun] => ERR10671802
                )

        )

    [analysis] => Array
        (
            [0] => stdClass Object
                (
                    [wgsAnalysisID] => 381
                    [wgsID] => 237
                    [refGenome] => cf4
                    [dateSubmitted] => 2023-03-22 11:11:00
                    [dateCompleted] => 2023-03-23 06:32:00
                    [bamMd5] => c2556e7b058e2acaf01d66bd664ce6c0
                    [rdsBam] => 1
                    [rcsBam] => 1
                    [totalReads] => 1016834920
                    [primaryReads] => 
                    [mappedReads] => 1014632719
                    [primaryMapped] => 
                    [pairedReads] => 996955170
                    [meanInsertSize] => 433.02
                    [meanReadDepth] => 30.95
                    [variantsCalled] => 6281837
                    [variantsFiltered] => 5954653
                    [snpCount] => 4178331
                    [snpHom] => 1555660
                    [snpHet] => 2622671
                    [indelCount] => 1786777
                    [insHom] => 253804
                    [delHom] => 360438
                    [insHet] => 540192
                    [delHet] => 671424
                    [genomicsDB] => 0
                    [varsity] => 0
                    [enaAnalysis] => ERZ21517651
                    [enaBam] => ftp.sra.ebi.ac.uk/vol1/analysis/ERZ215/ERZ21517651/XB_32654-cf4.bam
                )

        )

)

Sample Analyses

StartedResearcherCasesControlsStatus
20/05/2019 17:10eschofield254Running
12/05/2019 11:01eschofield250Completed
28/04/2019 12:33eschofield150Completed
28/04/2019 10:26eschofield150Error
28/04/2019 09:15eschofield150Error
20/04/2019 16:54eschofield140Completed

Results

chr3:40808242