Array
(
    [experiment] => Array
        (
            [0] => stdClass Object
                (
                    [BioSample] => SAMEA7190005
                    [wgsExptID] => 22
                    [Batch] => Edinburgh_12
                    [SeqLaboratory] => Edinburgh Genomics
                    [Platform] => Illumina
                    [InstrumentModel] => HiSeq X
                    [ReadType] => 150bp:PAIRED:30X
                    [LibraryPrep] => Edinburgh Genomics, TruSeq Nano
                    [PcrFree] => N
                    [SampleCount] => 20
                    [DateSubmitted] => 
                    [FastqID] => 123
                    [wgsID] => 66
                    [fwdFile] => BaH_35568_R1.fastq.gz
                    [fwdMd5] => 250b113c2f0c7ca6c0088106b5d80cef
                    [revFile] => BaH_35568_R2.fastq.gz
                    [revMd5] => 8575e6e91b7160aed59fe9a6c9aae526
                    [rawReads] => 
                    [FastqRCS] => 1
                    [enaExperiment] => ERX7019033
                    [enaRun] => ERR7448279
                )

        )

    [analysis] => Array
        (
            [0] => stdClass Object
                (
                    [wgsAnalysisID] => 100
                    [wgsID] => 66
                    [refGenome] => cf4
                    [dateSubmitted] => 2022-09-09 11:08:00
                    [dateCompleted] => 2022-09-10 08:14:00
                    [bamMd5] => 034ff3ce428c58c7a4d32821376145a0
                    [rdsBam] => 1
                    [rcsBam] => 1
                    [totalReads] => 834881705
                    [primaryReads] => 
                    [mappedReads] => 735484047
                    [primaryMapped] => 
                    [pairedReads] => 722230046
                    [meanInsertSize] => 467.55
                    [meanReadDepth] => 34.21
                    [variantsCalled] => 6210853
                    [variantsFiltered] => 5900874
                    [snpCount] => 4108819
                    [snpHom] => 1952054
                    [snpHet] => 2156765
                    [indelCount] => 1801931
                    [insHom] => 307455
                    [delHom] => 432151
                    [insHet] => 489591
                    [delHet] => 608786
                    [genomicsDB] => cf4-hound
                    [varsity] => 0
                    [enaAnalysis] => 
                    [enaBam] => 
                )

        )

)

Sample Analyses

StartedResearcherCasesControlsStatus
20/05/2019 17:10eschofield254Running
12/05/2019 11:01eschofield250Completed
28/04/2019 12:33eschofield150Completed
28/04/2019 10:26eschofield150Error
28/04/2019 09:15eschofield150Error
20/04/2019 16:54eschofield140Completed

Results

chr3:40808242