Array
(
    [experiment] => Array
        (
            [0] => stdClass Object
                (
                    [BioSample] => SAMEA7189975
                    [wgsExptID] => 9
                    [Batch] => Oxford_6
                    [SeqLaboratory] => Wellcome Trust Centre for Human Genetics
                    [Platform] => Illumina
                    [InstrumentModel] => HiSeq4000
                    [ReadType] => 100bp:PAIRED:15X
                    [LibraryPrep] => WTCHG, PCR FREE
                    [PcrFree] => Y
                    [SampleCount] => 5
                    [DateSubmitted] => 
                    [FastqID] => 469
                    [wgsID] => 115
                    [fwdFile] => BUT_25746_R1.fastq.gz
                    [fwdMd5] => fff1a29138d52ff8b304c2776cb30252
                    [revFile] => BUT_25746_R2.fastq.gz
                    [revMd5] => 8f22e167fa4299efe5049561c21dc2ab
                    [rawReads] => 
                    [FastqRCS] => 1
                    [enaExperiment] => ERX10810948
                    [enaRun] => ERR11403157
                )

        )

    [analysis] => Array
        (
            [0] => stdClass Object
                (
                    [wgsAnalysisID] => 231
                    [wgsID] => 115
                    [refGenome] => cf4
                    [dateSubmitted] => 2022-11-08 12:41:00
                    [dateCompleted] => 2022-11-09 07:33:00
                    [bamMd5] => 293e802e3b8d2bd3ddaa826272b216dd
                    [rdsBam] => 1
                    [rcsBam] => 1
                    [totalReads] => 760896252
                    [primaryReads] => 
                    [mappedReads] => 741044576
                    [primaryMapped] => 
                    [pairedReads] => 695501366
                    [meanInsertSize] => 294.55
                    [meanReadDepth] => 34.64
                    [variantsCalled] => 5516387
                    [variantsFiltered] => 5252063
                    [snpCount] => 3735733
                    [snpHom] => 
                    [snpHet] => 
                    [indelCount] => 1521978
                    [insHom] => 
                    [delHom] => 
                    [insHet] => 
                    [delHet] => 
                    [genomicsDB] => cf4-terrier
                    [varsity] => 0
                    [enaAnalysis] => ERZ21789629
                    [enaBam] => ftp.sra.ebi.ac.uk/vol1/analysis/ERZ217/ERZ21789629/BuT_25746-cf4.bam
                )

        )

)

Sample Analyses

StartedResearcherCasesControlsStatus
20/05/2019 17:10eschofield254Running
12/05/2019 11:01eschofield250Completed
28/04/2019 12:33eschofield150Completed
28/04/2019 10:26eschofield150Error
28/04/2019 09:15eschofield150Error
20/04/2019 16:54eschofield140Completed

Results

chr3:40808242