Array
(
    [experiment] => Array
        (
            [0] => stdClass Object
                (
                    [BioSample] => SAMEA7190096
                    [wgsExptID] => 18
                    [Batch] => Edinburgh_8
                    [SeqLaboratory] => Edinburgh Genomics
                    [Platform] => Illumina
                    [InstrumentModel] => HiSeq X
                    [ReadType] => 150bp:PAIRED:30X
                    [LibraryPrep] => Edinburgh Genomics, TruSeq Nano
                    [PcrFree] => N
                    [SampleCount] => 17
                    [DateSubmitted] => 2017-12-12
                    [FastqID] => 209
                    [wgsID] => 296
                    [fwdFile] => KE_24827_R1.fastq.gz
                    [fwdMd5] => 7561fc9e6918dc367438694ce83c618c
                    [revFile] => KE_24827_R2.fastq.gz
                    [revMd5] => 052a82123b6950d190351b106706c0d9
                    [rawReads] => 
                    [FastqRCS] => 1
                    [enaExperiment] => ERX10664693
                    [enaRun] => ERR11256484
                )

        )

    [analysis] => Array
        (
            [0] => stdClass Object
                (
                    [wgsAnalysisID] => 56
                    [wgsID] => 296
                    [refGenome] => cf4
                    [dateSubmitted] => 2022-01-10 11:55:00
                    [dateCompleted] => 2022-01-11 13:02:00
                    [bamMd5] => 5ed7d2e4e7aec075a19c27bc95948975
                    [rdsBam] => 1
                    [rcsBam] => 1
                    [totalReads] => 954994401
                    [primaryReads] => 
                    [mappedReads] => 847229388
                    [primaryMapped] => 
                    [pairedReads] => 827742236
                    [meanInsertSize] => 442.16
                    [meanReadDepth] => 40.12
                    [variantsCalled] => 6501935
                    [variantsFiltered] => 6154017
                    [snpCount] => 4298341
                    [snpHom] => 1790822
                    [snpHet] => 2507519
                    [indelCount] => 1867202
                    [insHom] => 280680
                    [delHom] => 395755
                    [insHet] => 554619
                    [delHet] => 678942
                    [genomicsDB] => cf4-utility
                    [varsity] => 0
                    [enaAnalysis] => ERZ21778101
                    [enaBam] => ftp.sra.ebi.ac.uk/vol1/analysis/ERZ217/ERZ21778101/KE_24827-cf4.bam
                )

        )

)

Sample Analyses

StartedResearcherCasesControlsStatus
20/05/2019 17:10eschofield254Running
12/05/2019 11:01eschofield250Completed
28/04/2019 12:33eschofield150Completed
28/04/2019 10:26eschofield150Error
28/04/2019 09:15eschofield150Error
20/04/2019 16:54eschofield140Completed

Results

chr3:40808242